GNPS Documentation
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CCMS-UCSD/GNPSDocumentation
GNPS Documentation
CCMS-UCSD/GNPSDocumentation
GNPS Introduction
Is my data compatible with GNPS?
Frequently Asked Questions
Superquick Start Guide
Quick Start Guide
GNPS Analysis Tools Overview
GNPS Lexicon
Mass Spec/Computational Background
Mass Spec/Computational Background
Molecular Networking
Data Preparation/Upload
Data Preparation/Upload
Mass Spectrometry File Conversion
File Conversion (Waters)
Shimazdu Gotchas
GNPS File Upload
Metadata
Recommended Data Analysis
Recommended Data Analysis
Molecular Networking
GC-MS Molecular Networking
GC-MS Molecular Networking
GC-MS on GNPS
GC-MS Deconvolution
GC-MS Library Search and Molecular Networking
Molecular Networking Views
Spectral Library Search
MASST Search (Mass Search Tool)
Result Views Navigation
Mass Spec Data Visualization
Mass Spec Data Visualization
GNPS Dashboard
GNPS Dataset Explorer
Metabolomics Spectrum Resolver
GNPS Dashboard Use Cases
Advanced Data Analysis
Advanced Data Analysis
Molecular Networking Files
Feature Based Molecular Networking
Feature Based Molecular Networking
FBMN Workflow
FBMN with MZmine
FBMN with MS-DIAL
FBMN with XCMS
FBMN with OpenMS
FBMN with MetaboScape
FBMN with Progenesis QI
FBMN with mzTab-M
FBMN export to Cytoscape
FBMN - Ion Identity Networking
FBMN - Ion Identity Networking
IIN Workflow
IIN with MZmine2
IIN with XCMS
IIN with MS-DIAL
MS2LDA and MotifDB Substructure Discovery
Molecular Networking in Cytoscape
DEREPLICATOR
DEREPLICATOR+
MolDiscovery
Network Annotation Propagation (NAP)
MS2LDA and MotifDB Substructure Discovery
MolNetEnhancer
MetaMiner
Sirius
Reanalysis of Data User Interface (ReDU)
Qemistree
MMVEC
Merge Network Polarity
Chemical Directionality
microbeMASST
Spectral Libraries
Spectral Libraries
Libraries List
Browsing Reference Spectral Libraries
Add/Curate Reference Spectrum in the Library
Reference Spectral Library Batch Addition
Reference Spectral Library mzVault Addition
Downloading Reference Spectral Libraries
Open-source Method for Reference Library Generation
Open-source Method for Reference Library Generation
MSMS-Chooser Workflow
Computational Data Acquisition Prep
Data Acqusition - Thermo QExactive (v1.0)
GNPS Tag Contribution and Analyses
Create a Public Datasets
Create a Public Datasets
Dataset Creation/Sharing
Continuous Identification
Molecule Explorer
Community/Social Features
Community/Social Features
User Page
Troubleshooting
Tutorial Guides
Tutorial Guides
Molecular Networking - Analog Discovery in Microbial Extracts
Feature-Based Molecular Networking (FBMN) with MZmine2 - Microbiome Molecules in Fecal Samples in American Gut Project
FBMN with MS-DIAL - Microbiome Molecules in Fecal Samples in American Gut Project
FBMN with MetaboScape - Coffee Analysis
FBMN analysis at GNPS
Reference Data Driven Analysis
Change Log
Join the GNPS community
GNPS Workshops/Training
GNPS Logos
Contact/Office Hours
GNPS Tool Index
API
For Developers
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