Conversion using machine software¶
- Select files needing to be converted
- Right click on files and select convert. This will open a window allowing you to choose the file type you want to change them to (e.g. mzML for later GNPS deconvolution)
If this does not work, try the solution below
- OpenChrom convert to mzXML
- MSConvert mzXML to mzML
This gets around an issue where Shimazdu likes to write retention times in milliseconds and pymzML does not read it.
Last update: May 11, 2022 00:47:09